PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc017625.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family AP2
Protein Properties Length: 239aa    MW: 26997.6 Da    PI: 4.3692
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc017625.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.48.4e-14187226145
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAaka 45 
                            s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa++
  Cse_sc017625.1_g030.1 187 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTALAAARL 226
                            78*******************......55**********9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MLDLNIDIAQ PSVDDRIHET NNVVEDRLSG TSVSSDVLDN DPPXIYIYIC IEDMLDLNID  60
IAQPSVDDRI HETNNVVEDR LSGTSVSSDV LDNDPPVANA DDVDSVTYVA SNIENRTYRE  120
NEKNGLKTRQ FFPVGCDLEV EDDEEEDELG SRSKIGSQWL NLKVPEVHVP QPAVAKKSRR  180
GPRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA LAAARLEFKL EKLFALGYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G39250.12e-22AP2 family protein