PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc017679.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 301aa    MW: 33589.3 Da    PI: 6.7369
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc017679.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.92.1e-171461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+eEd +lv +++++G+g+W++++   g+ R+ k+c++rw +yl
  Cse_sc017679.1_g030.1 14 KGPWTPEEDIILVTYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYL 61
                           79******************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MGRPPCCDKI GVKKGPWTPE EDIILVTYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TEQEEKMIIH LQALLGNSHH RSRGSNSSSS SESAMSKGKW ERRLQTDIHM  120
AKQALCEALS IDNKSINLPE ISSSIRTNPN LQIHQKTVVP PPPPQISHSS NTYASSAENI  180
ARLLPNWMNK PKKSSQTSSE SFSTTQTHGS FDGQFSSPPS EGLQHGINNH HSNNNYSNIS  240
DVSQSVSPDT SLFQDESKPN IQDEQLPPLS FLEKWLLDDA TAQEQEDSLM DLSLEETNGL  300
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62470.23e-75MYB family protein