PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017735.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 356aa MW: 40456.8 Da PI: 4.8856

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017735.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.4	1.1e-56	17	144	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrFhPtdee+v++yL++kv + ++++ ++i e+d++k+ePwdLpkk+k +ekew+fF++rd+ky+tg r+nrat+sgyWkatgk Cse_sc017735.1_g010.1 17 LPPGFRFHPTDEEIVTHYLTPKVLNGSFTA-TAIGEADLNKCEPWDLPKKAKMGEKEWFFFCQRDRKYPTGMRTNRATESGYWKATGK 103 79***********************999.88***********99999******************************* PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 dke+++ +++lvg+kktLvfy grapkgekt+Wvmhe+rle Cse_sc017735.1_g010.1 104 DKEIFRPERKLVGMKKTLVFYIGRAPKGEKTNWVMHEFRLE 144 ************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MELASQINEG DDSIIGLPPG FRFHPTDEEI VTHYLTPKVL NGSFTATAIG EADLNKCEPW 60 DLPKKAKMGE KEWFFFCQRD RKYPTGMRTN RATESGYWKA TGKDKEIFRP ERKLVGMKKT 120 LVFYIGRAPK GEKTNWVMHE FRLEGKFSYY NMSQPSEDEW VVCRVYHKNT VAQRSPVADH 180 GLNSFVDELL DSPSQLPALV EHSALDNDTS FTSNPSYFSL DQRDIHQSED YKNFLGSSSY 240 SYNFDTNAYQ AGPYMNEDQY ASKEIVPYAS GSTLYWSNKD DHKLEKDNVV GQCKVQRYIS 300 TPSVSHDTGV SNDMTTTGAS SSTSIIPTHD LKMKDYDPDD DIGPSTFSEL DTLLEF

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MELASQINEG DDSIIGLPPG FRFHPTDEEI VTHYLTPKVL NGSFTATAIG EADLNKCEPW  60
DLPKKAKMGE KEWFFFCQRD RKYPTGMRTN RATESGYWKA TGKDKEIFRP ERKLVGMKKT  120
LVFYIGRAPK GEKTNWVMHE FRLEGKFSYY NMSQPSEDEW VVCRVYHKNT VAQRSPVADH  180
GLNSFVDELL DSPSQLPALV EHSALDNDTS FTSNPSYFSL DQRDIHQSED YKNFLGSSSY  240
SYNFDTNAYQ AGPYMNEDQY ASKEIVPYAS GSTLYWSNKD DHKLEKDNVV GQCKVQRYIS  300
TPSVSHDTGV SNDMTTTGAS SSTSIIPTHD LKMKDYDPDD DIGPSTFSEL DTLLEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.1	1e-100	NAC family protein