PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017793.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 146aa MW: 16440.2 Da PI: 8.0601

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017793.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	35	57	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H Cse_sc017793.1_g030.1 35 FPCNYCRRKFYSSQALGGHQNAH 57 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 146 aa Download sequence
MSFLNLNCLP ENDLNDEYSS SSSSSPLGDP NQRVFPCNYC RRKFYSSQAL GGHQNAHKIE 60 RSLAKKSREL SSAVRPHSGY NQTMSMTGYS GLNHGRQVKP PAMMETNNQG YVGKFDAREM 120 ENGVNYGYKS ESVQEDFNQL DLSLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G24625.1	4e-22	C2H2 family protein