PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017869.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 407aa MW: 46359.1 Da PI: 6.8715

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017869.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	55.1	1.7e-17	113	172	4	54
G2-like 4 lrWtpeLHerFveaveqLG.Gs........ekAtPktilelmkvkgLtlehvkSHLQkYR 54 ++Wt+eLH++F++av qLG Gs + Pk+il+lm v+gLt+ +v+SHLQk R Cse_sc017869.1_g010.1 113 VEWTTELHAKFINAVIQLGeGSiispdnirTRCYPKNILDLMAVPGLTRMQVASHLQKCR 172 79**************8542333333336899**********************98 PP
2	Myb_DNA-binding	33.9	7.1e-11	114	171	3	47
SS-HHHHHHHHHHHHHTTTT............-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg............tWktIartmg.kgRtlkqcksrwqky 47 WTte++ ++++av qlG g +k I m g+t+ q+ s++qk Cse_sc017869.1_g010.1 114 EWTTELHAKFINAVIQLGEGsiispdnirtrcYPKNILDLMAvPGLTRMQVASHLQKC 171 6*******************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MSEQDDDEFI ISAIKSGAFL VMKKPLTMEA VSHIRQDVIR ERIRKREDYR SKSKNLKVES 60 QETGMQENGN MGSKRKDRGE SSKQATSSNF ESNLVFHWSE DDVVRTMKKK TCVEWTTELH 120 AKFINAVIQL GEGSIISPDN IRTRCYPKNI LDLMAVPGLT RMQVASHLQK CRREKWKNDE 180 KRFMRHSLWN YKLSSDFTSK RAAEKKFGCM PSIQINRHDQ EESSKPIGFN FTMNGWHQKE 240 VNIEQRAGYT PFNFQSGYGS KQDEGFGPIF TKTTHDYIQH DAVQDANHHT FSPDESQASD 300 DFPDFLTDLD GNGPNDNLIA ENIGQDRSCG TPDECVWMSR LYKGITCHDG DGGGYGCCDS 360 GGGGGLVLMV EVQKLELHCK RESQQHQLLL LLVASVWSRL RSEQLII

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MSEQDDDEFI ISAIKSGAFL VMKKPLTMEA VSHIRQDVIR ERIRKREDYR SKSKNLKVES  60
QETGMQENGN MGSKRKDRGE SSKQATSSNF ESNLVFHWSE DDVVRTMKKK TCVEWTTELH  120
AKFINAVIQL GEGSIISPDN IRTRCYPKNI LDLMAVPGLT RMQVASHLQK CRREKWKNDE  180
KRFMRHSLWN YKLSSDFTSK RAAEKKFGCM PSIQINRHDQ EESSKPIGFN FTMNGWHQKE  240
VNIEQRAGYT PFNFQSGYGS KQDEGFGPIF TKTTHDYIQH DAVQDANHHT FSPDESQASD  300
DFPDFLTDLD GNGPNDNLIA ENIGQDRSCG TPDECVWMSR LYKGITCHDG DGGGYGCCDS  360
GGGGGLVLMV EVQKLELHCK RESQQHQLLL LLVASVWSRL RSEQLII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	8e-16	ARR-B family protein