PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017924.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 228aa MW: 24897.6 Da PI: 7.5824

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017924.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	108.2	3.9e-34	127	184	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK vkg+++prsYYrC+sagCp+kk+ver+++d+k+v++tYeg+H+h+ Cse_sc017924.1_g010.1 127 NDGFRWRKYGQKLVKGNPNPRSYYRCSSAGCPAKKHVERASNDEKMVITTYEGRHDHD 184 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
ICYLDKLPLR RHADTVSPAT QTESGVMFSK LPEKPTGHSS VLPAKSHDPE TSEPETRQLQ 60 VVPSSQNVAE GAISQSIDMR SEVNNDVSSD AKRQKRDSSN MNEGISTKIN CEPRVVVQTT 120 SAVDIINDGF RWRKYGQKLV KGNPNPRSYY RCSSAGCPAK KHVERASNDE KMVITTYEGR 180 HDHDMPAAGR TVTQNMSGTG TGTTSFDNDG SRPTESGAMD MVLHVSAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	2e-41	WRKY family protein