PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc017952.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 242aa    MW: 28035.4 Da    PI: 8.7577
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc017952.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.19.8e-14123167347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +WT+eE+ +++ + + +G+g+W++I+r +  ++t+ q+ s+ qky
  Cse_sc017952.1_g050.1 123 PWTEEEHRRFLMGLQVHGKGDWRSISRNFVMTKTPTQVASHAQKY 167
                            7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MTTLSLSSNS MSSKVMHENK DSDWTDEQNT WFESALAIFD TETPDRWTNV AAMVPGKSEI  60
DVKKQYEKLK ADISEIEAGL VPDPGYETSS FKIELVEDHD FSIFRKRPSK FRPFDHERRK  120
GIPWTEEEHR RFLMGLQVHG KGDWRSISRN FVMTKTPTQV ASHAQKYYAR QHSDGKEKRR  180
PSIHDITMTN LPQNTNSPER SPNMMNYPFD IAKMNISGGN GMNIRVYNTG LHFQPSRYQI  240
QS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05790.14e-74MYB family protein