PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc018040.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 246aa    MW: 28924.9 Da    PI: 9.7784
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc018040.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1614.7e-50231483128
                    NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                            pGfrFhPtdeelv +yL++kv++k+l++ + ik++diyk++PwdLpk+ + +++e yfF+kr +ky+++ r+nr+t+sg+Wkatg d+
  Cse_sc018040.1_g010.1  23 PGFRFHPTDEELVGFYLRRKVDKKPLNF-DLIKQIDIYKYDPWDLPKTSDMRDNERYFFCKRGRKYRNSIRPNRVTDSGFWKATGIDR 109
                            9*************************99.99***************98888999********************************** PP

                    NAM  91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            +v+s+ ++  +glkk+Lv+y+g+a kg+kt+W+mhe+rl
  Cse_sc018040.1_g010.1 110 PVYSStRSVCIGLKKSLVYYRGSAGKGTKTEWMMHEFRL 148
                            ****856667***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MDTEKMKVIS KRQVDEDENI PLPGFRFHPT DEELVGFYLR RKVDKKPLNF DLIKQIDIYK  60
YDPWDLPKTS DMRDNERYFF CKRGRKYRNS IRPNRVTDSG FWKATGIDRP VYSSTRSVCI  120
GLKKSLVYYR GSAGKGTKTE WMMHEFRLPP SSPKNINHLD DVSISLEAEV WTLCRILKRN  180
VSNRKVVPDW RELSVKRNPV VDTGSKTCSE DSDHEMKSYI SFQNPSIQLN HEKNLYNHTN  240
GMNHLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-86NAC family protein