PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc018060.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 1193aa MW: 136044 Da PI: 6.2414

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc018060.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	24.9	3.9e-08	1026	1066	4	44
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW 44 ++s ed+++++ +++k+AAk+Lgv+l++LKr+ ++G++ W Cse_sc018060.1_g030.1 1026 KLSREDIEQQYGKTMKKAAKDLGVSLSTLKRKYNKLGMSGW 1066 7999****************************999999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 1193 aa Download sequence
MADSGDEEDP TGFLESFPTY RLHSKPRSGF DGLWVFSNKD EGYESNSYSS DDVGTRMMIY 60 DQIKSAFSKI HNNFYGLIAQ FWAPVTIGGK LQLSTSGQPF AVNYFHPSFE KYRRRCVEYP 120 YDIDVNSKFR GTPASAFLNR VPEIALMHGR VYHEVDPFLR NAFQECSLDS SVMIPIFCPS 180 QTSPSSDCIG VIECSSWHPS RAILFNEMNM KIKVGSGSGC VQYPRSYTIQ GKYAFCKYAH 240 NNKLKLSSFV TSLSYCEILH VFKYFTLVEQ TINGLKLARD QIQEALKIVC QSHQIALAQV 300 WIASLDENHV HFSSSWEEAQ TRQLLGLKLT GYNNIDEDSA LYCQIFQIYH DTCDMIPLQP 360 EQELVMKTLQ DYEPRFCENI SQLVTYKLIV FGILAGVNGI RSLTICMRSI HTGDFNYVFE 420 FLWNHNSFNP ILLEEILLEI KRCLPSFKFA FGTEIGDKLH VIDVDKSIGK EINKKFDIFQ 480 LKRLPPIPEA LKEGNKQVAM DYIVPLDTNC KTAPVLIPQP VIEQQFGTST TKNFLENIFC 540 NRNFWNDPDD ERLSEFLETL PTYILHKKPK TEGGLWVFCS KDEGSHNISS LGDLGTRMIH 600 DKIKSAFSKV CNGGELIVQF WAPITSGNRL VLSTSGQPFA VSVFGEGLEE YRGRCVGYEC 660 KTNMNNDNNK VIKNDIEQHE DHHPMTMISG PPTNAFLNRL PEAVLDTKNH REGSLMRYAS 720 DCGLWTSYTL PIGCPSQYYL SCIGVVECSS ISSINLEIVN TMNRALEQEG LNVFNVQDRI 780 PYNTINGLTL VRDEIQVALK SVCESHKIGV AQVWISYEDE NHVPFSFSSE DTQTTRRLAL 840 KLTGYNSVDE DSTVSNWRFK EYYDACDMVP LKKGEELVEK TLQDYQPRFC ENISQLGTDT 900 LMGWVSTDDV AFSGFTICMS IGTGDFNCAF EFIWHHNPNY VLLLEALLLM LKRCLPSFKF 960 ASGAELGDQL HVIDVDNSTK SETKFFKIFK EKRLSQIPEE IDKGKKAMVV NYNARSKEKH 1020 DTTEIKLSRE DIEQQYGKTM KKAAKDLGVS LSTLKRKYNK LGMSGWQGPD LPQRKAYNFN 1080 KKQRNESHTH EKDNGVIQDP SPVKRNEITV IKAEYADDII KLHLRISEAT FVTVENEIGK 1140 KFKLKHGTFK IKYLDEDEEW ILMTSDQDLS DCIQNSRTVD RSAVRLRVLL HNQ

Sequence ? help Back to Top

Protein Sequence Length: 1193 aa Download sequence

MADSGDEEDP TGFLESFPTY RLHSKPRSGF DGLWVFSNKD EGYESNSYSS DDVGTRMMIY  60
DQIKSAFSKI HNNFYGLIAQ FWAPVTIGGK LQLSTSGQPF AVNYFHPSFE KYRRRCVEYP  120
YDIDVNSKFR GTPASAFLNR VPEIALMHGR VYHEVDPFLR NAFQECSLDS SVMIPIFCPS  180
QTSPSSDCIG VIECSSWHPS RAILFNEMNM KIKVGSGSGC VQYPRSYTIQ GKYAFCKYAH  240
NNKLKLSSFV TSLSYCEILH VFKYFTLVEQ TINGLKLARD QIQEALKIVC QSHQIALAQV  300
WIASLDENHV HFSSSWEEAQ TRQLLGLKLT GYNNIDEDSA LYCQIFQIYH DTCDMIPLQP  360
EQELVMKTLQ DYEPRFCENI SQLVTYKLIV FGILAGVNGI RSLTICMRSI HTGDFNYVFE  420
FLWNHNSFNP ILLEEILLEI KRCLPSFKFA FGTEIGDKLH VIDVDKSIGK EINKKFDIFQ  480
LKRLPPIPEA LKEGNKQVAM DYIVPLDTNC KTAPVLIPQP VIEQQFGTST TKNFLENIFC  540
NRNFWNDPDD ERLSEFLETL PTYILHKKPK TEGGLWVFCS KDEGSHNISS LGDLGTRMIH  600
DKIKSAFSKV CNGGELIVQF WAPITSGNRL VLSTSGQPFA VSVFGEGLEE YRGRCVGYEC  660
KTNMNNDNNK VIKNDIEQHE DHHPMTMISG PPTNAFLNRL PEAVLDTKNH REGSLMRYAS  720
DCGLWTSYTL PIGCPSQYYL SCIGVVECSS ISSINLEIVN TMNRALEQEG LNVFNVQDRI  780
PYNTINGLTL VRDEIQVALK SVCESHKIGV AQVWISYEDE NHVPFSFSSE DTQTTRRLAL  840
KLTGYNSVDE DSTVSNWRFK EYYDACDMVP LKKGEELVEK TLQDYQPRFC ENISQLGTDT  900
LMGWVSTDDV AFSGFTICMS IGTGDFNCAF EFIWHHNPNY VLLLEALLLM LKRCLPSFKF  960
ASGAELGDQL HVIDVDNSTK SETKFFKIFK EKRLSQIPEE IDKGKKAMVV NYNARSKEKH  1020
DTTEIKLSRE DIEQQYGKTM KKAAKDLGVS LSTLKRKYNK LGMSGWQGPD LPQRKAYNFN  1080
KKQRNESHTH EKDNGVIQDP SPVKRNEITV IKAEYADDII KLHLRISEAT FVTVENEIGK  1140
KFKLKHGTFK IKYLDEDEEW ILMTSDQDLS DCIQNSRTVD RSAVRLRVLL HNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	6e-19	Nin-like family protein