PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc018092.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 132aa MW: 15574.8 Da PI: 10.2395

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc018092.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.2	5.8e-16	11	58	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W +eEde+l ++v lG ++W++ a + g++R++k+c++rw +yl Cse_sc018092.1_g010.1 11 RGPWLEEEDERLTKYVGALGEKHWDALAIESGLKRSGKSCRLRWKNYL 58 89********************************************97 PP
2	Myb_DNA-binding	52.2	1.4e-16	67	109	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 T eE+ ++d+ kq+G++ W++Ia++++ gRt++++k++w+++l Cse_sc018092.1_g010.1 67 ITHEEEHTIIDLQKQWGNK-WSRIAKRLP-GRTDNEIKNYWRSHL 109 599**************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 132 aa Download sequence
MVTFDVETLR RGPWLEEEDE RLTKYVGALG EKHWDALAIE SGLKRSGKSC RLRWKNYLRP 60 NLKLGEITHE EEHTIIDLQK QWGNKWSRIA KRLPGRTDNE IKNYWRSHLK KKSEAQQEGV 120 GHENRLKLGL KS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	1e-50	MYB family protein