PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc018140.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family M-type_MADS
Protein Properties Length: 191aa    MW: 21914 Da    PI: 6.5208
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc018140.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF58.39.7e-193381149
                           S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
                 SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                           k+ie +   +vtfskR+ g++KKA+EL++L++a++a+ + s+ +++y +
  Cse_sc018140.1_g020.1 33 KKIEKSNTHKVTFSKRLSGLFKKASELCILTGAQIAIFVKSPADRMYVF 81
                           6899999***************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MVSSSIDSMV STSIDTSPTI KKKSTGRKKI EIKKIEKSNT HKVTFSKRLS GLFKKASELC  60
ILTGAQIAIF VKSPADRMYV FGHPHANVLI EKYLQEKNND NVSLPNDFNQ RYEEFLREFE  120
AENTRNEMIG SNDHALCYDE PIDAMGLGEL ENYLCKLQKD RYDVEFVIFV YYDRSPFMWG  180
IVGKLVGESD F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-19M-type_MADS family protein