PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc018311.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 246aa    MW: 28448.9 Da    PI: 10.1083
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc018311.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.23e-181099195
                           EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS
                     B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88
                           ffkvl++++      l lp  fa e+ ++ k+e++t++le+ sg +W+vk+   k +++++l +GW +F k+n+Lk  Dfv+F l++   
  Cse_sc018311.1_g020.1 10 FFKVLLTESEVV---LQLPSAFAIEYfEKGKNETQTIMLETMSGDKWNVKY--AKIKDEHFLVDGWFDFMKENRLKKYDFVIFLLKSPhP 94
                           677776666655...56**********55556778****************..*******************************987545 PP

                           EE..EEE CS
                     B3 89 efelvvk 95
                           ++  ++k
  Cse_sc018311.1_g020.1 95 NT--HFK 99
                           55..444 PP
2B333.85.9e-11150244197
                            EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE- CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkld 85 
                            f+++ +++++++++ l l ++f ee g+  ++    +l++++g +W+vk+++ k+++     + ++ W++F k+n++k gD++ ++++
  Cse_sc018311.1_g020.1 150 FVTKIIQKSYFTERVLPLTRQFGEETGIGCQG--CAKLTNKKG-EWQVKVSMVKQGKFqkpRIVGSQWSKFLKDNKVKMGDTCKITHV 234
                            78899999999**99***********877544..588888665.8*****9955555556778899********************87 PP

                            SSSEE..EEEEE CS
                     B3  86 grsefelvvkvf 97 
                            +++   l+++v+
  Cse_sc018311.1_g020.1 235 KDNV--LHIRVI 244
                            6444..477776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MNFDKQSGGF FKVLLTESEV VLQLPSAFAI EYFEKGKNET QTIMLETMSG DKWNVKYAKI  60
KDEHFLVDGW FDFMKENRLK KYDFVIFLLK SPHPNTHFKV IFFGPEGCLT QPPNPRNTAD  120
TAKNVEKETS EDDSENMNMN QSKNKNKKSF VTKIIQKSYF TERVLPLTRQ FGEETGIGCQ  180
GCAKLTNKKG EWQVKVSMVK QGKFQKPRIV GSQWSKFLKD NKVKMGDTCK ITHVKDNVLH  240
IRVIKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26680.13e-12B3 family protein