PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc018444.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HB-other
Protein Properties Length: 179aa    MW: 21170.3 Da    PI: 9.2306
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc018444.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox49.86e-1657961756
                           HHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
               Homeobox 17 elFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                           +lF+++++p++++r eL+++l L++rqVk+WFqNrR+++k
  Cse_sc018444.1_g040.1 57 RLFKECPHPDEKRRLELSRRLCLETRQVKFWFQNRRTQMK 96
                           68***********************************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MSMRVDPVVI TWMVVAPVMI LMVMMENGQE KKDNTVILHN KFNNSKLHFI LCFGIFRLFK  60
ECPHPDEKRR LELSRRLCLE TRQVKFWFQN RRTQMKTQLE RHENSILRQE NDKLRAENMS  120
IRGAMRNPIC TDCGIGDISL EEQHLRLENA RLKDELDHVC ALAGKFLVRP XXPQCRTQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.28e-54HD-ZIP family protein