PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc018736.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 290aa MW: 33989.2 Da PI: 7.1919

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc018736.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.7	1.2e-15	86	188	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkek.dg 74 ++Y eY+++ F+++ks+ k++ +++eit+r C+k gkr+++ + ++k++r+++++ ++C ak+ ++ ++ Cse_sc018736.1_g010.1 86 DMYLEYSQKGRFNICKSNIKRN-NKREITHRSILCNKAGKRRSKVEVntlkegeeeeegdNKKRKRKTVSKACNCPAKIALRDICwKA 172 58*************99998.7777***********9988899******9889999999**********999 PP FAR1 75 kwevtkleleHnHela 90 ++v++++++HnH+l+ Cse_sc018736.1_g010.1 173 AYKVIDFVENHNHQLM 188 **************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MVEITEQGSI QLGEGSSSRY LQVENTTTID QTNREEHSYE SDIEIYEADP EFVPTPKGTP 60 YWAPDIPEDE KPKRGDIFDT FDLAYDMYLE YSQKGRFNIC KSNIKRNNKR EITHRSILCN 120 KAGKRRSKVE VNTLKEGEEE EEGDNKKRKR KTVSKACNCP AKIALRDICW KAAYKVIDFV 180 ENHNHQLMNE NNTDLSRARR QLQFGPTKAH HRKVALMGGY DKVRGTPMDW RNFRRVVNSF 240 VGDRDAQMLV DKMINRKNHV PEFSFEYHID TQEELVSFFW ADETMKCCIW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	146	151	KKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	6e-08	FAR1 family protein