PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc018762.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 289aa    MW: 31267.1 Da    PI: 8.8521
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc018762.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.12.4e-061121241527
                            -TTTTT-SS-SSS CS
                zf-CCCH  15 CkyGdrCkFaHgp 27 
                            C +Gd+C+FaH++
  Cse_sc018762.1_g020.1 112 CTFGDKCRFAHSE 124
                            ***********95 PP
2zf-CCCH361.2e-11259283227
                            -S---SGGGGTS--TTTTT-SS-SSS CS
                zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                            kt+ C++f++ G+C +GdrC+FaHg+
  Cse_sc018762.1_g020.1 259 KTKMCDNFLK-GQCTFGDRCHFAHGE 283
                            899*******.*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MFNLYTAMDF GARNRGRNGA PKRSREEMES FSPGVGSKSK PCMKFFSTAG CQFGEGCHFS  60
HYIPGGYNAA SQFTNMGGPI SRKPPMQQPF TDGPAPPTKS KLCNRINTPE GCTFGDKCRF  120
AHSEAEMGGR PSFSSYENPR GPMNFSGYQG RFEPSPAAAN FGQSATAKIS IESSLAGPVI  180
GKGGVHSKQI CRVTGVKLHV RDHETDPNQK NIELEGSFDQ IKEASAMVQE IIMNLGGANE  240
GRKGGGFQQQ QPGGINNIKT KMCDNFLKGQ CTFGDRCHFA HGENELRSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12130.13e-74C3H family protein