PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc018833.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WOX
Protein Properties Length: 252aa    MW: 28203.3 Da    PI: 6.3998
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc018833.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox69.24.9e-2279139257
                            T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
               Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                            r+R+t+t+ ql++Le+lF + n +ps+++++e++++l    +++e++V++WFqNrRa+ k+
  Cse_sc018833.1_g010.1  79 RQRWTPTPVQLQILERLFDQgNGTPSKQKIKEITSELsqhgQISETNVYNWFQNRRARSKR 139
                            89*****************99**************************************97 PP
2Wus_type_Homeobox101.94.5e-3379141365
      Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                            r+RWtPtp Q++iLe+l+++G  tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq
  Cse_sc018833.1_g010.1  79 RQRWTPTPVQLQILERLFDQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQ 141
                            79***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MEHDDVNNNN NSNGMFVKVM TDEQMEVLRK QIAIYATICE QLVDLHKSLT SHHDLTGVRL  60
GNLYSDPLVT SGGHKFSGRQ RWTPTPVQLQ ILERLFDQGN GTPSKQKIKE ITSELSQHGQ  120
ISETNVYNWF QNRRARSKRK QQVSAPNNGE SEVETEVESP KPQQNSASTA DDNMCFQNPN  180
VSSGITSADQ RAKKVEPIFP SDASSKLAGN VGQMSYYGSM LANPRMDHII GKMEVSGGYQ  240
PYMQNDEYNM TG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133141RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.14e-79WOX family protein