PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc019034.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 292aa    MW: 32390.6 Da    PI: 5.0061
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc019034.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.62e-07141185755
                            HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            er r RR++iN ++  L+el+P +    +k    a++L + +++++sLq
  Cse_sc019034.1_g030.1 141 ERVRARREKINARMKLLQELVPGC----NKISGTAMVLDEIINHVQSLQ 185
                            567899*****************9....89999***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MEKREEMCYQ FVEDEIESLI SPPEGGSSFT ALLELPANQV VKLLDSPVGF PAPEAGNLSS  60
VLGDNDVNLV KEEPVELRNS EESDPVVSKS VKRKEREKKV KLPVKKSKNV VNESDGDKEK  120
LPYVHVRARR GQATDSHSLA ERVRARREKI NARMKLLQEL VPGCNKISGT AMVLDEIINH  180
VQSLQRQVEF LSMRLAAVHP SIDINIDNMF SAESGSLMDC NFHGMVSPPL SLDGQINGHS  240
QQLWQTDGLP PQPLWGAEEV NPNFITPENS LLSYDSSGNS ASLHTNQLKM EL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.23e-62bHLH family protein