PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019066.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 253aa MW: 28340.7 Da PI: 6.146

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019066.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.2	2.9e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWTteEd +l+ +++ G g+W++ ++ g+ R++k+c++rw +yl Cse_sc019066.1_g030.1 14 RGRWTTEEDNILLSYIQANGEGSWRALPKNAGLLRCGKSCRLRWINYL 61 8*****************************99**********97 PP
2	Myb_DNA-binding	52.7	9.8e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eE++l+++ ++ lG++ W++Ia +++ gRt++++k++w+++l Cse_sc019066.1_g030.1 67 RGNISPEEEDLILKMHASLGNK-WSLIAGHLP-GRTDNEIKNYWNSHL 112 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MGRAPCCQKV GLRRGRWTTE EDNILLSYIQ ANGEGSWRAL PKNAGLLRCG KSCRLRWINY 60 LKSDVKRGNI SPEEEDLILK MHASLGNKWS LIAGHLPGRT DNEIKNYWNS HLSRKIAQNT 120 AKRTSTKKTR KPRKTSSLSS KQSNMNPSSD GLLADPNGTS PLMLSTNTEN ELVQSDLATA 180 SSSMGDSNEE NSNEHECDWD WDFEIDNSMV GLGLGFEGEN FDGDVLSWPW ESPTTQVGLD 240 MKKQDEMIAW LMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	2e-70	MYB family protein