PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019191.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 403aa MW: 45605.7 Da PI: 5.4045

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019191.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	55.1	2.6e-17	35	108	53	128
NAM 53 aeekewyfFskrdkkyatgkrknratk.sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + e++wyf ++r++k+++gkr+nr+tk g+Wka+ + k+ + +++vg k+ L + ++kg+kt W+mhey+ Cse_sc019191.1_g010.1 35 SCENKWYFLTPRQRKHPNGKRPNRKTKsGGTWKASQTGKPQRDDMNRVVGSKTCLFYI---DEKGNKTAWLMHEYTT 108 45789*****************8874689999999999899999999999888...78899********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MRSIYTTMVL MNLQFASNLT GNLFFDTTAK PEYRSCENKW YFLTPRQRKH PNGKRPNRKT 60 KSGGTWKASQ TGKPQRDDMN RVVGSKTCLF YIDEKGNKTA WLMHEYTTDN PNIPLGSQEQ 120 IEDNNMLTRW VLCKIYKKET KPANNNVGNQ EEAFEEQYQQ LQDEPSPRRR RLSLINQESN 180 QSNGPEHVPV QETNYHLETD VQMAESVKFM LTSNQQSDLN IVHGGASQTF PTTSMNTSPN 240 PVTVQPMAMF CGSKLTQPAV QDPPQAFAMD QVQQSVGNST MVYYQNQSRP TSTNGFQLCC 300 GASSSSSRVS PPAILEPGDN DMTPVPHEED IYDNLAPLDD FMISPSHALA FQMDTNSNPM 360 TMQQMGSSQT LSNEVLQQHV QNSYDDTQSF CDQSMIVHKN DYI

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MRSIYTTMVL MNLQFASNLT GNLFFDTTAK PEYRSCENKW YFLTPRQRKH PNGKRPNRKT  60
KSGGTWKASQ TGKPQRDDMN RVVGSKTCLF YIDEKGNKTA WLMHEYTTDN PNIPLGSQEQ  120
IEDNNMLTRW VLCKIYKKET KPANNNVGNQ EEAFEEQYQQ LQDEPSPRRR RLSLINQESN  180
QSNGPEHVPV QETNYHLETD VQMAESVKFM LTSNQQSDLN IVHGGASQTF PTTSMNTSPN  240
PVTVQPMAMF CGSKLTQPAV QDPPQAFAMD QVQQSVGNST MVYYQNQSRP TSTNGFQLCC  300
GASSSSSRVS PPAILEPGDN DMTPVPHEED IYDNLAPLDD FMISPSHALA FQMDTNSNPM  360
TMQQMGSSQT LSNEVLQQHV QNSYDDTQSF CDQSMIVHKN DYI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15500.1	8e-23	NAC family protein