PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019275.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 342aa MW: 39075 Da PI: 5.5807

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019275.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.2	4.2e-36	49	139	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 Fl+k+y+++ed++++++i+ws+ g+sfvvld++ f++++Lp+yFkh+nf+SFvRQLn+YgF+k++ + weF++++F +g Cse_sc019275.1_g020.1 49 FLTKVYDMVEDKSIDDIIRWSRGGQSFVVLDPQAFSTNLLPRYFKHNNFSSFVRQLNTYGFRKIDPDI---------WEFANETFVRG 127 9*************************************************************9876.........******* PP XXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkk 101 +++ l++ikrk+ Cse_sc019275.1_g020.1 128 QRHVLKNIKRKR 139 ********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MDPFYSVVKE EYQSSGSGSG DGRGARQMIM SVQIPQPMEG LHDAGPPPFL TKVYDMVEDK 60 SIDDIIRWSR GGQSFVVLDP QAFSTNLLPR YFKHNNFSSF VRQLNTYGFR KIDPDIWEFA 120 NETFVRGQRH VLKNIKRKRA PSQSLSPQKT QSPGSETATL GSDEVGRLKH EKEVLMMELV 180 KLRQKQQNTR AQIQAMEVRL QGTEEKQRKM MRFLAKAMQN PDFIRKLVKH GKGKELQEAF 240 MNQIGESSGG SKLIKAEPED FTDASTFEVS ELEALALEMQ GFGRNQRNQE EESNKLEFKG 300 GERELDDEFW EELFSERVDD KSGVEDVNFL AEKLDFLGSS PK

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MDPFYSVVKE EYQSSGSGSG DGRGARQMIM SVQIPQPMEG LHDAGPPPFL TKVYDMVEDK  60
SIDDIIRWSR GGQSFVVLDP QAFSTNLLPR YFKHNNFSSF VRQLNTYGFR KIDPDIWEFA  120
NETFVRGQRH VLKNIKRKRA PSQSLSPQKT QSPGSETATL GSDEVGRLKH EKEVLMMELV  180
KLRQKQQNTR AQIQAMEVRL QGTEEKQRKM MRFLAKAMQN PDFIRKLVKH GKGKELQEAF  240
MNQIGESSGG SKLIKAEPED FTDASTFEVS ELEALALEMQ GFGRNQRNQE EESNKLEFKG  300
GERELDDEFW EELFSERVDD KSGVEDVNFL AEKLDFLGSS PK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	4e-93	HSF family protein