PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc019323.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 172aa    MW: 19056.3 Da    PI: 4.6539
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc019323.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.14.9e-111358555
                           HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                           h   Er RR+++ + f  L +llP++     +K + a++Le A++YIk+L+
  Cse_sc019323.1_g020.1 13 HVSHERDRREKLAQQFISLSTLLPTP-----TKTDMASVLEDACNYIKELE 58
                           7778**********************.....9****************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MGKVSNTNHD QDHVSHERDR REKLAQQFIS LSTLLPTPTK TDMASVLEDA CNYIKELESH  60
VKELEESSAG CNSKDVRESP DDEASSSHKT KHGEDIEVQM SGKSVLVQFQ CKRDSSSYVN  120
VLGEMINIGL SIISTNAVTF TSTTLFINVV AEMADDFCMT PTDLSKNLQQ VL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.27e-19bHLH family protein