PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019337.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 428aa MW: 49185.7 Da PI: 8.5779

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019337.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.00058	224	247	2	23
EETTTTEEESSHHHHHHHHHH..T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt..H 23 kC C ++F+ k++L+ H+rt H Cse_sc019337.1_g040.1 224 KCAACYRHFNIKEHLVEHMRTsyH 247 6999****************9777 PP
2	zf-C2H2	12.3	0.00053	254	271	3	20
ETTTTEEESSHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHi 20 C++Cgk++++ ++L+ H+ Cse_sc019337.1_g040.1 254 CGYCGKRCRSFESLREHL 271 *****************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MDAREQSMRG VCFEFLNKGK CEKGEDCTYK HSLQEERSRS RECWFCLSSP NVESHLITSV 60 GENCYCVIAK GPLHLPNTLS SPPECEVELV KFHNSLKAYF NSHKKEVVFF EWVYIKMSHA 120 NLQAIPIPVN RASAVQDIFN LAAEKLGFKF MTTKVLREEN YCMLNMTENV VYSMWNSLEV 180 QYYHIQLKRT RNSRCLKIKG SLMDPKRAGM VPHAPKGQGI PRNKCAACYR HFNIKEHLVE 240 HMRTSYHSFH EPMCGYCGKR CRSFESLREH LIGPLPKAEC ERVFRDHGCD ICLNIFRFLH 300 RFSSLGIQDE LRIDSGKTRA VALACKMVGG GSDGSLDLCA KVYIIDEYED ILFQSYVKPH 360 LPVTHYRYNF WPSSPNSEWW FNSSSYCFRI KARRSDLSKS VGISGKVFNN LALTAACLLV 420 VKDNSTIV

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MDAREQSMRG VCFEFLNKGK CEKGEDCTYK HSLQEERSRS RECWFCLSSP NVESHLITSV  60
GENCYCVIAK GPLHLPNTLS SPPECEVELV KFHNSLKAYF NSHKKEVVFF EWVYIKMSHA  120
NLQAIPIPVN RASAVQDIFN LAAEKLGFKF MTTKVLREEN YCMLNMTENV VYSMWNSLEV  180
QYYHIQLKRT RNSRCLKIKG SLMDPKRAGM VPHAPKGQGI PRNKCAACYR HFNIKEHLVE  240
HMRTSYHSFH EPMCGYCGKR CRSFESLREH LIGPLPKAEC ERVFRDHGCD ICLNIFRFLH  300
RFSSLGIQDE LRIDSGKTRA VALACKMVGG GSDGSLDLCA KVYIIDEYED ILFQSYVKPH  360
LPVTHYRYNF WPSSPNSEWW FNSSSYCFRI KARRSDLSKS VGISGKVFNN LALTAACLLV  420
VKDNSTIV