PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019338.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WOX

Protein Properties

Length: 189aa MW: 21603.9 Da PI: 9.8123

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019338.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59	8e-19	14	73	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ Le +++ ++p+a+++++++++l +++ ++V++WFqN++a++++ Cse_sc019338.1_g010.1 14 SRWCPTPEQVMLLEGMYRGgLKTPTATQIQQITARLsiygKIQGKNVFYWFQNHKARDRQ 73 6***************99***********************************996 PP
2	Wus_type_Homeobox	110.9	6.8e-36	14	74	4	64
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +RW+PtpeQ+++Le +y+ Gl+tP++ +iq+ita+L+ yGki++kNVfyWFQN+kaR+rqk Cse_sc019338.1_g010.1 14 SRWCPTPEQVMLLEGMYRGGLKTPTATQIQQITARLSIYGKIQGKNVFYWFQNHKARDRQK 74 8***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
METVVSRSSS GGGSRWCPTP EQVMLLEGMY RGGLKTPTAT QIQQITARLS IYGKIQGKNV 60 FYWFQNHKAR DRQKIRKKLM AMYQYQERLY PSYPLPYNHH PYSFQGGASF VEDKSSSINM 120 VNEWNVDQTC KKVMCDCPLM TVVMMENTMS HGTRVPPKTL QLFPTTTTTG LKDHMSSIIS 180 HVNHSCQPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	2e-27	WOX family protein