PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc019339.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 906aa    MW: 103270 Da    PI: 9.2551
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc019339.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR145.91.8e-1486185190
                   FAR1   1 kfYneYAkevGFs....vrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwe 77 
                            ++Y +YA+e+GF+    +rks++k+  r+g ++++ +vC++eg +++ + +       +k+ rt++   tgCka+ +  ++  + k++
  Cse_sc019339.1_g010.1  86 NMYMRYASEAGFEagfgIRKSTQKRL-RDGFVKEKYLVCNREGCPKKIRLNtlapkkGDKQVRTSNFRITGCKARAVFYMMPgSIKYR 172
                            589****9887652221666666665.9999**************998888899887788888999999************9999*** PP

                   FAR1  78 vtkleleHnHela 90 
                            +t+++ eHnHel 
  Cse_sc019339.1_g010.1 173 LTTFDVEHNHELD 185
                            ***********96 PP
2FAR153.21e-16710805190
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 
                            ++Y +YA+e+GF +rks++k+  r+g ++++ +vC++eg +++ + +       +k+ rt++   tgCka+ +  ++  + k+++t++
  Cse_sc019339.1_g010.1 710 NMYMRYASEAGFGIRKSTQKRL-RDGFVKEKYLVCNREGCPKKIRLNtlapkkGDKQVRTSNFRITGCKARAVFYMMPgSIKYRLTTF 796
                            58***************99998.9999**************998888899887788888999999************9999******* PP

                   FAR1  82 eleHnHela 90 
                            + eHnHel 
  Cse_sc019339.1_g010.1 797 DVEHNHELD 805
                            *******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 906 aa     Download sequence    
MEIFYLNKVP VSVGEDSIDL DVTSSICASN VDDNASSSSG LKTSSSFIHH DFIDNPGGSV  60
FWVPRVAASV LPVLFSVYDS VEDCINMYMR YASEAGFEAG FGIRKSTQKR LRDGFVKEKY  120
LVCNREGCPK KIRLNTLAPK KGDKQVRTSN FRITGCKARA VFYMMPGSIK YRLTTFDVEH  180
NHELDRVEYK HLSKSERKLT YTEQLFIIKA SNYNLGATRA HMMHICLINR MEYRKKFTSD  240
FSFDYLVENA ELIGLFWADQ VAKLNYKDLA ISSHLMPLTK LRNNHRRSVT VGSGLLKNET  300
TESYVWLLQA FKKAFVRSPN IIVTDQDGAM RKAIGEVLPD SKHMLCMWIR ASWIPAFFVD  360
SPLCGQMRTT SRSESENSFF SHFTSPISKL VKFMCKSCGE GCDVSVISEE KPDANIVPRM  420
VDDETNSDNT EEELNLYQKD IGEYKVVHNK LDGSVACCCQ LFVRCGILCR HIFCVFKNCK  480
VVSIPDQYLL RRWTRDLIPA DLRRKKARYG QNNEEIEKLA IEATGLVESC VHMMSNNKGK  540
LTSFVDKLRK LKTEVEADLP TVPSRNVSEI VEEFIGIKRP TKIYVKNPSK ASNKGFMRER  600
IKGGREKAFD KSKKQKKTCS ICGLTEHNRT TCPDKGKYLT CNAEVGGNSA EGVLVQVEVE  660
SSAGLKTSSS FIHHDFIDNP GGSVFWVPRV AASVLPVLFS VYDSVEDCIN MYMRYASEAG  720
FGIRKSTQKR LRDGFVKEKY LVCNREGCPK KIRLNTLAPK KGDKQVRTSN FRITGCKARA  780
VFYMMPGSIK YRLTTFDVEH NHELDRVKYK HLSKSERKLT YTEQLFIIKA SNYNLGATRA  840
HMMHICLINR MEDRKKFTSD FSFDYLVENA ELIGLFWADQ VAKLNYKEFG DIVSFDATYK  900
TNKYVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.23e-14FAR1 family protein