PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019409.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bZIP

Protein Properties

Length: 443aa MW: 48305.6 Da PI: 6.6889

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019409.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.8	1.8e-16	228	284	3	59
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 ++kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L eN++L k+l +++++ + Cse_sc019409.1_g010.1 228 DVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDISQKYNEA 284 579*****************************************9999999988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MDRMFSVDDF WSAGDEDESS SSSSASKSQQ QKSNMMMNRS MSEWQFQRFL QETSSVPPES 60 SSSKVGNDNN NSKKDDVVVV EVKDPDENNK NKNESTTTFV GPPNVPVDSE EYQAYLKSRL 120 NLACAAVALT RASSVKAQDF TALPDNGSQA SNTSQLGYQA PSKGSCLSGF DPKIAGKDGG 180 APIGIPSLPV VPKKAAIPVK SATSGSSREL SDDDELDTET TQNMDPTDVK RVRRMLSNRE 240 SARRSRRRKQ AHLTELETQV SQLRVENSSL LKRLTDISQK YNEAAVDNRV LKADVETMRA 300 KVKMAEESVK RITGFNPMVQ VMSDMSTLGP MPSYSCSPSD ASGDTSIPIQ DDMKQQHFYP 360 SQPTPATTNH NIPATRVPQN TMVNLPPAEN VQHPNPAMSE VGAQKIGRTA SMQRVASLEH 420 LQKRFRGDVG GSSCGTTQGN GDR

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MDRMFSVDDF WSAGDEDESS SSSSASKSQQ QKSNMMMNRS MSEWQFQRFL QETSSVPPES  60
SSSKVGNDNN NSKKDDVVVV EVKDPDENNK NKNESTTTFV GPPNVPVDSE EYQAYLKSRL  120
NLACAAVALT RASSVKAQDF TALPDNGSQA SNTSQLGYQA PSKGSCLSGF DPKIAGKDGG  180
APIGIPSLPV VPKKAAIPVK SATSGSSREL SDDDELDTET TQNMDPTDVK RVRRMLSNRE  240
SARRSRRRKQ AHLTELETQV SQLRVENSSL LKRLTDISQK YNEAAVDNRV LKADVETMRA  300
KVKMAEESVK RITGFNPMVQ VMSDMSTLGP MPSYSCSPSD ASGDTSIPIQ DDMKQQHFYP  360
SQPTPATTNH NIPATRVPQN TMVNLPPAEN VQHPNPAMSE VGAQKIGRTA SMQRVASLEH  420
LQKRFRGDVG GSSCGTTQGN GDR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	243	250	RRSRRRKQ
2	245	250	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	1e-65	bZIP family protein