PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc019429.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 183aa    MW: 20941.1 Da    PI: 10.0646
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc019429.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.21.4e-0926106789
                   FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                            A+++GF +++ ksk+    g  ++ +f+Cs++g +++e  + ++ +r++++++++C  +l  k  k  + w ++     HnH++
  Cse_sc019429.1_g030.1  26 AESIGFVIVIGKSKTY--RGYKYSIEFKCSRHGASSREGLE-DELQRQTSTDKCNCPFRLLAKFIKsFNGWILKVKCPGHNHNF 106
                            899*********9998..5667***************9999.888999999************999788898888889****86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MSSSPFNTQE VFGTEVDLIN WVRSTAESIG FVIVIGKSKT YRGYKYSIEF KCSRHGASSR  60
EGLEDELQRQ TSTDKCNCPF RLLAKFIKSF NGWILKVKCP GHNHNFPDSL HGFSQAMRLK  120
ESELVFVRQM TKQRVAPRII LSSIKEMDPN NVSTIKTVYN AQEKIRRDSR GDLTPIQLLL  180
VHL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163169EKIRRDS