PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc019447.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 298aa    MW: 33712.2 Da    PI: 8.5408
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc019447.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.51.8e-18226259134
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                            C++C  tkTp+WR+gp g+ktLCnaCG++yr+ +
  Cse_sc019447.1_g010.1 226 CAHCEITKTPQWREGPTGPKTLCNACGVRYRSGR 259
                            *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MVRGFAMESQ DMRMCKTEPG LTADYNHRVY DEDCFGDIDI LNLFDFPMES LEGDGLAEDW  60
AAKLGPIPSE VLSSQIGVGN SFGSSTDLPF EYPVLNNITS QLKYSQNYYE ETPKHYPSVR  120
VPQLKQEPMF VEDKKLYPSQ ASPNSVLESR SSSSNSNKGI SFGIEISIPV RTRSKRLRPT  180
TNPWLLSPIT MFPNKDKKRK KPTQRPFIME TKGAEEMSDD VGVKKCAHCE ITKTPQWREG  240
PTGPKTLCNA CGVRYRSGRL YPEYRPAASP TFVPALHSNS HRKVIEMRQK AYNRPENA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171176RTRSKR
2197201KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.22e-42GATA family protein