PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc019516.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 350aa    MW: 40771.7 Da    PI: 8.2592
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc019516.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.87.3e-084499148
                   FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........t 48
                           ++Yn+YA+e+GF+v+ks+++++ ++g ++++  +C++eg +++ + +         +
  Cse_sc019516.1_g010.1 44 EMYNKYAEEAGFEVKKSAQRNT-KSGLVKSKYRMCNREGVPKDININtldlkssdkQ 99
                           58***************98887.77778888899******99987776766654321 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MTPRPTLYAH EETPGGSVYW EPVVDHIYLP VEGKKFKTIE ECIEMYNKYA EEAGFEVKKS  60
AQRNTKSGLV KSKYRMCNRE GVPKDININT LDLKSSDKQV RNTRQRAHNL LCSMKGGSQY  120
VHGTSSDFKN HQRDINVCIG ESDAQMLINK MENRKKYVPN FTFHYMVEKS ELVAMFWADE  180
VAKCNYKEFG DIVSFDATFR TNKIIYDSHG IPNESHRVIY DSLRITYDSL RIIYDSHGIP  240
NEYYIIIYDS HIRYGVKIVI FRYDMVFVPF TGIDNHKKCV TLGAGMLLRE DEEAYTWLLK  300
SFMTAHQKQP KMIVTDQDGA MKLAIEEVFT ESKHRLCMWH ITQKIPSKVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-16FAR1 family protein