PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019535.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 202aa MW: 23478.6 Da PI: 9.0665

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019535.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.2	0.00027	32	54	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k +++ L H+++H Cse_sc019535.1_g030.1 32 FMCNFCKKEYKSAQALGGHMNVH 54 89*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MDHKFKSKWE SNNLIYDKDY GYDGISWRQK NFMCNFCKKE YKSAQALGGH MNVHRRDRAR 60 LRLSSPSLDQ PPSPNPNPNT NLNPNFTSPQ SSLLCLPYKT FNASLLPLAS PSSTMKIEEK 120 QEMFQFTPHK ARNFLGEMTK KMNMEGSLEN VTGGYYGSFI DQENESRVWK QRESFRLELE 180 MGLLKDGKFE MELDLELRLG RS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23130.1	2e-20	C2H2 family protein