PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019542.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 370aa MW: 43566.4 Da PI: 4.6795

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019542.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.1	1.6e-34	71	163	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 Flkk++e+++d++++e+iswse+++sfv++d+++f++++Lp+ Fkh+nf+SFvRQLn+Y Fkk++ ++ weF+++ F+kg Cse_sc019542.1_g010.1 71 FLKKTFEMVDDPKTDEIISWSETQKSFVLWDPHKFSTDLLPQRFKHNNFSSFVRQLNTYRFKKIDPDR---------WEFANEFFQKG 149 9**************************************************************999.........******* PP XXXXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkkse 103 kk+ll++ikr++++ Cse_sc019542.1_g010.1 150 KKHLLRDIKRRTTQ 163 *********876 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MQVVKEPIYD ENQDFLEIKE EPLVVVLDKD DDEIMKVKEE PILVFDDDQE GFLDGLPKPI 60 EGLRDGGPPP FLKKTFEMVD DPKTDEIISW SETQKSFVLW DPHKFSTDLL PQRFKHNNFS 120 SFVRQLNTYR FKKIDPDRWE FANEFFQKGK KHLLRDIKRR TTQSQIMQKQ TIAEQQQSCA 180 HQTGSSIESE LEILRKDRTA LRQEILKMKQ QQESMDKHLE VVQERMLRME FKQQKMLLFM 240 SKAFRNRAFV HLLQHLVQKK EMGSVEMCKR RKVEQMLSAV NADELSCAQE VWNMIEADAC 300 TAFSSEESVS PPEDQKISDK SGVSNSDNNS ESFILWEKLM EDELIFGDDE SQKDQPETYL 360 QEWEELIPKV

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MQVVKEPIYD ENQDFLEIKE EPLVVVLDKD DDEIMKVKEE PILVFDDDQE GFLDGLPKPI  60
EGLRDGGPPP FLKKTFEMVD DPKTDEIISW SETQKSFVLW DPHKFSTDLL PQRFKHNNFS  120
SFVRQLNTYR FKKIDPDRWE FANEFFQKGK KHLLRDIKRR TTQSQIMQKQ TIAEQQQSCA  180
HQTGSSIESE LEILRKDRTA LRQEILKMKQ QQESMDKHLE VVQERMLRME FKQQKMLLFM  240
SKAFRNRAFV HLLQHLVQKK EMGSVEMCKR RKVEQMLSAV NADELSCAQE VWNMIEADAC  300
TAFSSEESVS PPEDQKISDK SGVSNSDNNS ESFILWEKLM EDELIFGDDE SQKDQPETYL  360
QEWEELIPKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	9e-70	HSF family protein