PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019557.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 293aa MW: 32875.4 Da PI: 6.0753

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019557.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.1	8.3e-13	6	48	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+W++eEde l ++++++G++ W +I++ + gR++ +c sr+++ Cse_sc019557.1_g020.1 6 GPWSPEEDEMLRNLIEKHGSN-WPLISKSIS-GRSGDSCWSRLLS 48 89***************99.*****.*******9986 PP
2	Myb_DNA-binding	40.7	5.5e-13	52	92	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++T+eEd l ++v+++G + W++I++ ++ g +++ c++rw+ Cse_sc019557.1_g020.1 52 SFTPEEDTMLQNLVEKHGHN-WSLISNSIP-GTSANTCRLRWL 92 79**************88.*****.*********6 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MDQIEGPWSP EEDEMLRNLI EKHGSNWPLI SKSISGRSGD SCWSRLLSLY LSFTPEEDTM 60 LQNLVEKHGH NWSLISNSIP GTSANTCRLR WLFVHRPFTP EEDETNYEDI TIVSLMNSDR 120 NYFLHKVCYI NRVLGKMARD NVSQLSGGMP TFKRTLFPFS GHERPQQIYT TATSETLWSL 180 NTNRTQGNSR FHLAMETESQ NSIHQGNSSH EVGGVVSGQA PSISDMARGN MSSGGTHSYS 240 HDHSAPSWNA LYKRDSSPMM IDNDNVQELV GGEFGRNDLS VVSSTSIVQG KGW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	1e-18	MYB family protein