PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc019599.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 363aa    MW: 41109 Da    PI: 8.8934
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc019599.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H220.61.1e-06193212120
                            EEETTTTEEESSHHHHHHHH CS
                zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                            ++Cp+C+k F+r  nL+ H+
  Cse_sc019599.1_g030.1 193 FSCPICSKNFTRYNNLQMHM 212
                            89*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MTNPNFLKGG LPFISHHPYQ CYYYSSNDRP SLPYPYHNMS PTSIPPLLEA LPLLSKLSHK  60
RDLELQQHDH PLSNPTMEDE NIWCFSSSTS TTNSVVNVTL NIGLPTTPSY PSYSEDKGIH  120
SDEFLPGFSC CPKEKGIIGN EKLLGVDWCP NGSEKNDVNK DEMLLGYPLN RLIKTNQYWI  180
PNPSQILTGP VQFSCPICSK NFTRYNNLQM HMWGHGSQYR KGPESLKGSQ PTAMLKLPCY  240
CCAPGCRHHI DHPRSRPLKD FRTLQTHYKR KHGTKPFGCR KCGKAIAVKG DWRTHEKNCG  300
RVWYCNCGSD FKHKRSLKDH VKAFGHGHAG ISSIGFFQKQ EDEGMLSDLI CASKKMVSYL  360
IKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.11e-100C2H2 family protein