PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019617.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 606aa MW: 69418.7 Da PI: 6.0244

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019617.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	25.5	2.7e-08	439	479	4	44
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW 44 e+s ed+++++ +++k+AA eLgv+l++LKr+ ++G++ W Cse_sc019617.1_g050.1 439 ELSREDIEQHYGKTMKKAAEELGVSLSTLKRKHNKLGMSGW 479 7999****************************999999888 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MADYGEDPSA FLESFPTYRL HSKPQSLFNG PWVLSSKDER YENYSYSSDD AGTRTMIYDM 60 IISAFSKMGI GYGFIAQFWA PVTIGGKHFL STSGQPFAVS LLHKDITEYR RHCVEHVYDI 120 DVNSKFRGTP ASAFLNRFPE ITSMYSSAYH EVDPLLRYAF HECTLTTSFM IPICCPSQIS 180 SSSNCIGVIE CASFTNPELF NEMNLKIKEV GLSVYNVQDR IPYKTINGLK LARDQIQEAL 240 KIVCQSHQIA LAQVWIASLD ENYMHFSSSW EEAQTRRLLG LKLTGCIDED SAKYSQNFQY 300 YHDACDSIPL QPGEELVLKT YQDYEPRLCK NISKLGIYGS MGLTICMRSI HTGDFNYVFE 360 FLWEDNSFYP IFLEELLLKI KSCLPSFKFA SGTEIGDELH VIEVDNFTGK EIKKFDIFQL 420 KRLSPIHEAM NKRDTTEIEL SREDIEQHYG KTMKKAAEEL GVSLSTLKRK HNKLGMSGWQ 480 GPDLLQRKAY NSKKNQSKES QTHDKDNGVI QDPSPVKRNE NTVIKAEYED DIIRLHLPIS 540 EATFVTVENE IGKKFKLQHG TFKIKYLDED KEWILMTSDQ DLSDSIQNSI NVDRSAVRLR 600 VLLHSQ

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MADYGEDPSA FLESFPTYRL HSKPQSLFNG PWVLSSKDER YENYSYSSDD AGTRTMIYDM  60
IISAFSKMGI GYGFIAQFWA PVTIGGKHFL STSGQPFAVS LLHKDITEYR RHCVEHVYDI  120
DVNSKFRGTP ASAFLNRFPE ITSMYSSAYH EVDPLLRYAF HECTLTTSFM IPICCPSQIS  180
SSSNCIGVIE CASFTNPELF NEMNLKIKEV GLSVYNVQDR IPYKTINGLK LARDQIQEAL  240
KIVCQSHQIA LAQVWIASLD ENYMHFSSSW EEAQTRRLLG LKLTGCIDED SAKYSQNFQY  300
YHDACDSIPL QPGEELVLKT YQDYEPRLCK NISKLGIYGS MGLTICMRSI HTGDFNYVFE  360
FLWEDNSFYP IFLEELLLKI KSCLPSFKFA SGTEIGDELH VIEVDNFTGK EIKKFDIFQL  420
KRLSPIHEAM NKRDTTEIEL SREDIEQHYG KTMKKAAEEL GVSLSTLKRK HNKLGMSGWQ  480
GPDLLQRKAY NSKKNQSKES QTHDKDNGVI QDPSPVKRNE NTVIKAEYED DIIRLHLPIS  540
EATFVTVENE IGKKFKLQHG TFKIKYLDED KEWILMTSDQ DLSDSIQNSI NVDRSAVRLR  600
VLLHSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	5e-23	Nin-like family protein