PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc019689.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 339aa    MW: 38594.9 Da    PI: 8.8767
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc019689.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.13.5e-171461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g W++eEde+l++ ++++G g+W+++++  g+ R++k+c++rw +yl
  Cse_sc019689.1_g020.1 14 KGLWSPEEDEKLIRHITKFGHGCWSSVPKLAGLERCGKSCRLRWINYL 61
                           678*******************************************97 PP
2Myb_DNA-binding44.73.1e-1467109145
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                            rg ++++E++l++++++ lG++ W+ Ia+ ++ gRt++++k+ w+
  Cse_sc019689.1_g020.1  67 RGTFSQQEEKLIIELHAVLGNK-WSQIAAQLP-GRTDNEIKNLWN 109
                            899*******************.*********.*********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MGRHSCCYKQ KLRKGLWSPE EDEKLIRHIT KFGHGCWSSV PKLAGLERCG KSCRLRWINY  60
LRPDLKRGTF SQQEEKLIIE LHAVLGNKWS QIAAQLPGRT DNEIKNLWNS SIKKKLRQRG  120
IDPNTHKALS EVNDKALSAS NDKNSQGSYN LDEKAKPAPA APIATTYPLL DNPTPATHEF  180
FLNRFVTTKQ TESINLNEFL PFSYSQPQQE SSDLFFNTDS NSLLSASTRS TSNFQQNTFM  240
SSNNNASLFQ TSSGYNPSWG LADNTKSQNQ VNSVENDQDY IKWNDQFLQV PFLIEKSSNE  300
TKPEVNLGVN NHEIYHGQQS VDSYNKHFQR ISTSYGQFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01680.37e-87MYB family protein