PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc019721.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 181aa    MW: 20706.2 Da    PI: 9.631
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc019721.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.28.8e-094070131
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartm 31
                           rg+WT +Ed ll+++++ +G g+W++ a+  
  Cse_sc019721.1_g040.1 40 RGPWTLDEDNLLIQYITCHGEGRWNSLAKSS 70
                           89************************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MGRTSPFSSS GVPIFTVHTR YSQNKISSSC HEQEVGELRR GPWTLDEDNL LIQYITCHGE  60
GRWNSLAKSS EARKQVMEAT ERLGGQYSPH LHPHCTHLVQ LPGRTDNEIK NYWRTKVQKQ  120
ARYLKIDSNS KKFVEALKQF WLPRLLEKVE QSSPSSSSTS TTTMDAYQKN LSHQALSNGW  180
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.13e-35MYB family protein