PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc019726.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 249aa    MW: 28132 Da    PI: 9.8263
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc019726.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.87.3e-52141381128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtdeelvv+yLk+kv++ +l++ ++i+evd++k++Pw+Lp +    e+e +fFs+++ ky++g+r+nrat+sgyWkatg 
  Cse_sc019726.1_g040.1  14 LPPGFRFHPTDEELVVQYLKRKVHSFPLPA-SIIPEVDVCKSDPWELPGN---CEQERFFFSTKEVKYPNGNRSNRATESGYWKATGL 97 
                            79****************************.89***************44...46899****************************** PP

                    NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            dk+++++ +++lvg+kktLvfy+g+ p+g++tdW+mheyrl
  Cse_sc019726.1_g040.1  98 DKKIVTScNNQLVGMKKTLVFYRGKPPNGSRTDWIMHEYRL 138
                            *****9988899***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MERLNFVKNG VLRLPPGFRF HPTDEELVVQ YLKRKVHSFP LPASIIPEVD VCKSDPWELP  60
GNCEQERFFF STKEVKYPNG NRSNRATESG YWKATGLDKK IVTSCNNQLV GMKKTLVFYR  120
GKPPNGSRTD WIMHEYRLAT PQPKNPPQGM ENWVICRIFL KKRGSNANRN DEETKPTIPT  180
ISDCKSLKSK PIFYDFMAAG ASKRRRTDLN LTPTSSASGS SGITDDASSC DEHEASSNKL  240
NDVSTLKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-99NAC family protein