PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019824.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 319aa MW: 36279.1 Da PI: 9.8995

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019824.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.2	3.9e-18	28	75	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+ +++q+G g+W++ +++ g++R++k+c++rw++yl Cse_sc019824.1_g020.1 28 KGPWTLEEDQKLISYIQQFGQGSWRSLSAKAGLKRCGKSCRLRWNNYL 75 79*********************************************7 PP
2	Myb_DNA-binding	47.7	3.5e-15	82	125	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g ++ eE+ +++++++lG++ W++Ia +++ +Rt+ +k++w+++ Cse_sc019824.1_g020.1 82 GTFSLEEERTIIQLHALLGNR-WSAIATHLP-NRTDSKIKNHWNSH 125 789****************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MGKSDRCEKK KSRLKNNNDN GVAVGLKKGP WTLEEDQKLI SYIQQFGQGS WRSLSAKAGL 60 KRCGKSCRLR WNNYLRPDIK TGTFSLEEER TIIQLHALLG NRWSAIATHL PNRTDSKIKN 120 HWNSHIKKRL AKMGIDPMTH KPENHTELHG SNLSHMTQWE AARLEAEARL ALQPKHHPYQ 180 QPNLISPSST PSYQEYHLRS KILNGGFQTL NSTYRLLKDV PLILPSTPVT NYVESKNLFN 240 QGVNIKPYDK SETLIEPFEE FVYPNDANFI TNNFLVRPPG FVEGFVDHPI GGAENHEVND 300 ARSGLSSPIT WFRPGQCSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.2	2e-70	MYB family protein