PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc019876.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YB
Protein Properties Length: 197aa    MW: 22572.3 Da    PI: 7.0291
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc019876.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB179.92.3e-5624119297
                  NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkk 89 
                            +eqdrflPianv+rimkkv+P+n+kiskdaketvqecvsefisfvt+easdkcqrekrktingdd+lwa++tlGf+dyveplk+yl k
  Cse_sc019876.1_g010.1  24 KEQDRFLPIANVGRIMKKVIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDILWAITTLGFDDYVEPLKLYLLK 111
                            89************************************************************************************** PP

                  NF-YB  90 yrelegek 97 
                            yr+leg+k
  Cse_sc019876.1_g010.1 112 YRQLEGDK 119
                            ******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MDDVKQGKRS PESPCLKNNN NNNKEQDRFL PIANVGRIMK KVIPGNGKIS KDAKETVQEC  60
VSEFISFVTG EASDKCQREK RKTINGDDIL WAITTLGFDD YVEPLKLYLL KYRQLEGDKV  120
NNNIPKQQQC IEHQQMQQHQ NSLPTYRNVY SSPATNLMSQ QHYATIGEQA FALPFSSNSI  180
NTQLHHQQES IDSVEQW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G13570.13e-63NF-YB family protein