PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019924.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 372aa MW: 42127.7 Da PI: 7.2562

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019924.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99	3.2e-31	94	147	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rFv+a+e+LGG+e+AtPk +l+lm++kgL+++hvkSHLQ++R+ Cse_sc019924.1_g010.1 94 PRLRWTPDLHLRFVQAIERLGGQERATPKLVLQLMNIKGLSISHVKSHLQMFRS 147 9****************************************************7 PP
2	Myb_DNA-binding	51.4	2.4e-16	95	146	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++v+a+++lGg t+k++ + m+ kg++ ++ks++q+++ Cse_sc019924.1_g010.1 95 RLRWTPDLHLRFVQAIERLGGQeraTPKLVLQLMNiKGLSISHVKSHLQMFR 146 89***********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MNKSSTFCEK DAQKDYPTKQ NPSFPDADQH ENVYIGDDDD YDGDESEEVD HNSSGGSSRH 60 KNGSSSSNST VEETSEKKAS GSGSVRPYVR SKNPRLRWTP DLHLRFVQAI ERLGGQERAT 120 PKLVLQLMNI KGLSISHVKS HLQMFRSKKF DDPNQEQGIL SEGDDHHIFH LSQLPMLQSY 180 NQSSLSKFRY QDGLWSPQAS INYNPFVGGL RQGVYGSMVE RILARNNFGN DHSSFKQEHT 240 SWRSVQSNHV EESKMGLLKN NIDGLSMLNQ LRRNNILMDN KVIIKDREQE KRVLKRKETD 300 QESKHLDLNL SLEIKIPKQD ITNGKKGKEE FDENDLSLSL FSPITNSNSS SISRSKHAKT 360 MDSSGASLDL TL

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MNKSSTFCEK DAQKDYPTKQ NPSFPDADQH ENVYIGDDDD YDGDESEEVD HNSSGGSSRH  60
KNGSSSSNST VEETSEKKAS GSGSVRPYVR SKNPRLRWTP DLHLRFVQAI ERLGGQERAT  120
PKLVLQLMNI KGLSISHVKS HLQMFRSKKF DDPNQEQGIL SEGDDHHIFH LSQLPMLQSY  180
NQSSLSKFRY QDGLWSPQAS INYNPFVGGL RQGVYGSMVE RILARNNFGN DHSSFKQEHT  240
SWRSVQSNHV EESKMGLLKN NIDGLSMLNQ LRRNNILMDN KVIIKDREQE KRVLKRKETD  300
QESKHLDLNL SLEIKIPKQD ITNGKKGKEE FDENDLSLSL FSPITNSNSS SISRSKHAKT  360
MDSSGASLDL TL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	5e-48	G2-like family protein