PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020202.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 143aa MW: 16421.8 Da PI: 5.648

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020202.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.4	2.2e-10	28	67	3	44
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 +W++eEde l + k++ + W+ I + ++ gR++++c +r+ Cse_sc020202.1_g010.1 28 PWSPEEDEMLQNINKKHNFN-WRQIDEFIP-GRSANSCMLRL 67 8*****************.*****.******997 PP
2	Myb_DNA-binding	39.9	1e-12	73	114	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T+eEde +++a++++G + W+tIar + Rt+ +k+++ Cse_sc020202.1_g010.1 73 PFTPEEDETILHAHARFGDE-WATIARLLS-ARTGDVIKNHYSL 114 79**************99.*****.********965 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
MDPIEGPWSP EEDEMLIGPV SLLKKDVPWS PEEDEMLQNI NKKHNFNWRQ IDEFIPGRSA 60 NSCMLRLSLL YRPFTPEEDE TILHAHARFG DEWATIARLL SARTGDVIKN HYSLLKCKSK 120 LMTKGDITIV SLMNVTKTGT FYA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	5e-29	MYB family protein