PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020202.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 256aa MW: 28905.7 Da PI: 10.1343

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020202.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.9	3.6e-16	47	89	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +g+W++eEde l ++v+++G++ W+ I + ++ gR++k c+ rw+ Cse_sc020202.1_g020.1 47 KGPWSPEEDEMLQNLVEKHGPN-WSVIGKFIP-GRSAKTCRVRWF 89 79****************77.*****.*********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MESDESGVIK MKNKTSLSKY RLRRKKGLRL AMSSVNNSQK KDMDPIKGPW SPEEDEMLQN 60 LVEKHGPNWS VIGKFIPGRS AKTCRVRWFS SPQVMPFTPE EDHTILLSHA YYGDKWVSIA 120 KKLIGRPYDV IQNHWNSTLK WKSSSMTNEA KIQPPSVSDI NCGLGNSYIH DCNLSLAVAP 180 SISDMTRDNM SSGGTHSYRS DHSAPSRDAL SKRDSSQIMS DSDNSSEVSS FEPVRPSRLN 240 RVSSKKRTKM SRFFEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	2e-42	MYB family protein