PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc020202.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family CAMTA
Protein Properties Length: 107aa    MW: 13094 Da    PI: 9.8295
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc020202.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1138.91.6e-4371062103
                   CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahs 88 
                            l+e + rwl++ e++ iL+n+ek++ + +++++p s sl+    +++r+frkDG++w++kkdg+tv+E++e+LKvg++e+l+cyYah+
  Cse_sc020202.1_g040.1   7 LQEaQFRWLRPAEVLFILQNYEKFRQSPDPPQKPASNSLFY---RVLRFFRKDGHNWRRKKDGRTVHEAYERLKVGNIEALICYYAHG 91 
                            556599********************************984...8******************************************* PP

                   CG-1  89 eenptfqrrcywlLe 103
                            eenp+fqrrcyw+Le
  Cse_sc020202.1_g040.1  92 EENPKFQRRCYWMLE 106
                            **************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
YNLGELLQEA QFRWLRPAEV LFILQNYEKF RQSPDPPQKP ASNSLFYRVL RFFRKDGHNW  60
RRKKDGRTVH EAYERLKVGN IEALICYYAH GEENPKFQRR CYWMLEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.26e-47CAMTA family protein