PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020271.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 480aa MW: 54086.4 Da PI: 4.6093

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020271.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	154.8	3.9e-48	25	151	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 ppGfrFhPtdeelv ++Lk+k+ g++l++ ++i ++d+yk++P d+p +k k+++++w+fFs+rd++y++g r+nrat +gyWkatg Cse_sc020271.1_g020.1 25 PPGFRFHPTDEELVLYWLKRKICGRSLKI-DIIGDLDVYKWDPDDFPglAKWKTGDRQWFFFSPRDRRYPSGARANRATMHGYWKATG 111 9**************************.99***********65588999***************************** PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 kd+ +++ ++++vg kktL++y grap+ge+tdWvmhey+l Cse_sc020271.1_g020.1 112 KDRIITC-NSRTVGSKKTLIYYLGRAPSGERTDWVMHEYTL 151 ***.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MDPLLSSSNV IEKQGSSSSM EKLFPPGFRF HPTDEELVLY WLKRKICGRS LKIDIIGDLD 60 VYKWDPDDFP GLAKWKTGDR QWFFFSPRDR RYPSGARANR ATMHGYWKAT GKDRIITCNS 120 RTVGSKKTLI YYLGRAPSGE RTDWVMHEYT LDEEELRRCN YVKNYYNVCK FFKKSGAGPK 180 NGEQYGAPFV EEEWADDDGH VNIDALLVQN TNMFVNEPNP TSAITAEPTI VPPMAQINPV 240 NGESFDQRVA NESFVEEQQP FAVNEDFLEL DDLISPQPTL PNSEQPIVDD LPFDDVDEFC 300 AFDFCNDPTT LNETNPVISQ HIQHPSYATN LVYGMENSDF RSYYNTNIET DHSSLITDQS 360 NHNFTEPQAA EHPFSAPSGV ITNNGEGYGG FSSALWDYVE SVPTSPAFAL ESSALVNKVF 420 EQMPCSLNRV SNTKNGARRV KRSSRSSSMG ILYFSVLGVL FAILCVFLGT SIELLGRSIL

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MDPLLSSSNV IEKQGSSSSM EKLFPPGFRF HPTDEELVLY WLKRKICGRS LKIDIIGDLD  60
VYKWDPDDFP GLAKWKTGDR QWFFFSPRDR RYPSGARANR ATMHGYWKAT GKDRIITCNS  120
RTVGSKKTLI YYLGRAPSGE RTDWVMHEYT LDEEELRRCN YVKNYYNVCK FFKKSGAGPK  180
NGEQYGAPFV EEEWADDDGH VNIDALLVQN TNMFVNEPNP TSAITAEPTI VPPMAQINPV  240
NGESFDQRVA NESFVEEQQP FAVNEDFLEL DDLISPQPTL PNSEQPIVDD LPFDDVDEFC  300
AFDFCNDPTT LNETNPVISQ HIQHPSYATN LVYGMENSDF RSYYNTNIET DHSSLITDQS  360
NHNFTEPQAA EHPFSAPSGV ITNNGEGYGG FSSALWDYVE SVPTSPAFAL ESSALVNKVF  420
EQMPCSLNRV SNTKNGARRV KRSSRSSSMG ILYFSVLGVL FAILCVFLGT SIELLGRSIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-100	NAC family protein