PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020342.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 349aa MW: 39107.3 Da PI: 8.4375

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020342.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	95.7	7.3e-30	17	152	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgy 82 lppG++F P++++l+++yL+ k ++++ + i+e+d+y++eP +Lp+ ++++k+wy F k + ++ +++r + gy Cse_sc020342.1_g010.1 17 LPPGCQFFPSEQQLITHYLTLKNNHSPSQN--LITEIDLYRYEPFNLPEsacflfGREGKKKHWYCFEKMGRVKRGRGETRR-AGGGY 101 79****************9999988555..8***********55788764455778****998876666666.588 PP NAM 83 Wkatgkdkevlsk..kgelvglkktLvfykgr...apkgektdWvmheyrl 128 Wk +g+ k++++ +g +vg++k +vfy g+ ++g++t+W+m ey+l Cse_sc020342.1_g010.1 102 WKRSGSVKDIVCGgvEGVVVGVRKCFVFYLGKvavGRSGVRTKWIMYEYSL 152 **********8778888******66411267889*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MEEEDSIIPN PNPNLSLPPG CQFFPSEQQL ITHYLTLKNN HSPSQNLITE IDLYRYEPFN 60 LPESACFLFG REGKKKHWYC FEKMGRVKRG RGETRRAGGG YWKRSGSVKD IVCGGVEGVV 120 VGVRKCFVFY LGKVAVGRSG VRTKWIMYEY SLVDHKMADA SYVLCRVFAK SHHRCNISNN 180 VLKSSHENPK TVRHIGVQCD DTPGPVMTGS GMIKRSSIDS AENNGSKKIC TPSGKLSDGP 240 PAAVQENAMA FEGDFLELND LLCGVDNIVT RLVYQDLPCG FDRHFCCHGR ESIMIHGKTG 300 HVMAKPVRIR CFISSVLFRL LVVRLSFCFL NDLLEPLAVL PILDVCWVL

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MEEEDSIIPN PNPNLSLPPG CQFFPSEQQL ITHYLTLKNN HSPSQNLITE IDLYRYEPFN  60
LPESACFLFG REGKKKHWYC FEKMGRVKRG RGETRRAGGG YWKRSGSVKD IVCGGVEGVV  120
VGVRKCFVFY LGKVAVGRSG VRTKWIMYEY SLVDHKMADA SYVLCRVFAK SHHRCNISNN  180
VLKSSHENPK TVRHIGVQCD DTPGPVMTGS GMIKRSSIDS AENNGSKKIC TPSGKLSDGP  240
PAAVQENAMA FEGDFLELND LLCGVDNIVT RLVYQDLPCG FDRHFCCHGR ESIMIHGKTG  300
HVMAKPVRIR CFISSVLFRL LVVRLSFCFL NDLLEPLAVL PILDVCWVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15500.1	3e-19	NAC family protein