PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020418.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 258aa MW: 29275 Da PI: 7.2651

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020418.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.1	2.2e-14	5	52	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ed++l d++ +G g+W++++ g+ R +k+c++rw +yl Cse_sc020418.1_g020.1 5 KGLWSPDEDKKLRDYIVNHGLGCWSSVPINAGLQRNGKSCRLRWTNYL 52 678*******************************************97 PP
2	Myb_DNA-binding	48.1	2.7e-15	58	103	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+++++ ++ +lG++ W+ +r+++ gR+++++k++w++yl Cse_sc020418.1_g020.1 58 RGAFTKHEEQIIITLHGMLGNK-WSQMSRRLP-GRSDNEIKNHWHSYL 103 89******************.*****.**********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MKCKKGLWSP DEDKKLRDYI VNHGLGCWSS VPINAGLQRN GKSCRLRWTN YLRPGLKRGA 60 FTKHEEQIII TLHGMLGNKW SQMSRRLPGR SDNEIKNHWH SYLKKKSAKL ENIKTKSMSV 120 DTLSEELSSA SSIKSRFSSL EPSQHMEELS AHAEPSNYSK EVHLKVPPKI LFSEWLPLNS 180 DESQEATTEG GSLSHDTQEG ISVRNLQPSP ELNIENNIYD LIFEDNICPN FNIGDAIMYS 240 CDELYYYASP SLLNSGSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48920.1	2e-53	MYB family protein