PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc020529.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HD-ZIP
Protein Properties Length: 273aa    MW: 30412.3 Da    PI: 8.3616
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc020529.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.21.4e-18129183256
                            T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
               Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                            rk+ ++tk q   Lee+F+ ++ ++ +++++LA++l+Lt rqV vWFqNrRa+ k
  Cse_sc020529.1_g060.1 129 RKKLRLTKPQSALLEEAFKLHNSLNPKQKQDLARELKLTPRQVEVWFQNRRARTK 183
                            678899***********************************************98 PP
2HD-ZIP_I/II120.58.7e-39129218191
            HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 
                            +kk+rl+k q++lLEe F+ ++ L+p++K++lareL+l+prqv+vWFqnrRARtk+kq+E+dye+Lk+++++l++en+rL+ke +eL+
  Cse_sc020529.1_g060.1 129 RKKLRLTKPQSALLEEAFKLHNSLNPKQKQDLARELKLTPRQVEVWFQNRRARTKLKQTEMDYEHLKKCCETLTDENRRLHKELQELK 216
                            69*************************************************************************************9 PP

            HD-ZIP_I/II  89 eel 91 
                             +l
  Cse_sc020529.1_g060.1 217 -TL 218
                            .55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MGFDSICNTG LVLGLSLNSS PPTITSNTMN TDTIPTFEPS LTLGLLGNTN VNKKLVVSGG  60
GDHLGGLYRQ DSTVNSGGGS SFSNMSVKRE REVGSEESER VSNDNNYSRV MSATSVDDNE  120
DDDSYVNGRK KLRLTKPQSA LLEEAFKLHN SLNPKQKQDL ARELKLTPRQ VEVWFQNRRA  180
RTKLKQTEMD YEHLKKCCET LTDENRRLHK ELQELKTLKS SQPLYMQMPA ATLTMCPSCE  240
RIGDTKSSVV ENPFTMAAKP RFFKSFTNPS AAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1178186RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.11e-78HD-ZIP family protein