PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020573.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 358aa MW: 41397.1 Da PI: 5.0697

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020573.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.3	1.4e-34	14	105	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 F+ k+ye+++d+ +++++sws+n++sfvv+++ ef+ ++Lp++Fkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F kg Cse_sc020573.1_g030.1 14 FIVKTYEMVDDPLTDHIVSWSHNERSFVVWNPPEFSGELLPRFFKHNNFSSFIRQLNTYGFRKIDPEQ---------WEFANEDFVKG 92 9*************************************************************9998.........******* PP XXXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkks 102 + +ll++i+rkk Cse_sc020573.1_g030.1 93 QPHLLRNIHRKKP 105 ********985 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MNDVQGNVNN LPPFIVKTYE MVDDPLTDHI VSWSHNERSF VVWNPPEFSG ELLPRFFKHN 60 NFSSFIRQLN TYGFRKIDPE QWEFANEDFV KGQPHLLRNI HRKKPVHSHS MHNINMNGAS 120 SSSPLTESER IQYKKDLYRL RYEKESLSLE FQKVQQVQEE IDLAARALTE RLKSARKQQI 180 DFLCALDNTL QKPAQFLETN DRKRRLLAET SDQASSFNVP LSDAFSTDTL LDFDTELVEK 240 LESSVTFWED ILTEARGAFV QQVPQPVVYH EPPISPHMDS EPSKTVETNE VRESGNVGHV 300 QAGVNDGFWE QFFTETPGGS MTDNDRKGFD QYGKFWWNMR SVNSLADQMG QLAQSERT

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MNDVQGNVNN LPPFIVKTYE MVDDPLTDHI VSWSHNERSF VVWNPPEFSG ELLPRFFKHN  60
NFSSFIRQLN TYGFRKIDPE QWEFANEDFV KGQPHLLRNI HRKKPVHSHS MHNINMNGAS  120
SSSPLTESER IQYKKDLYRL RYEKESLSLE FQKVQQVQEE IDLAARALTE RLKSARKQQI  180
DFLCALDNTL QKPAQFLETN DRKRRLLAET SDQASSFNVP LSDAFSTDTL LDFDTELVEK  240
LESSVTFWED ILTEARGAFV QQVPQPVVYH EPPISPHMDS EPSKTVETNE VRESGNVGHV  300
QAGVNDGFWE QFFTETPGGS MTDNDRKGFD QYGKFWWNMR SVNSLADQMG QLAQSERT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	201	206	DRKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	2e-85	HSF family protein