PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc020626.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 147aa    MW: 16383.8 Da    PI: 8.3683
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc020626.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.71.5e-067093226
                           -S---SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                           k  lC ff + G+C  G +CkF+H+
  Cse_sc020626.1_g020.1 70 KSILCEFFKA-GQCAKGFKCKFSHD 93
                           6679**7777.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MLRGCGVLTG YVEYTCNWRL LALNGLSHHS QYEKTIEKKK EEENAREKEL NDLFKIAVVQ  60
PKVPVGVDPK SILCEFFKAG QCAKGFKCKF SHDLNRKGEK IDIFNDKRDE GNPTELTKSY  120
ISLTGQHSAQ SMDVQAACAV AAASKSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20280.13e-33C3H family protein