PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020757.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 126aa MW: 14073.1 Da PI: 9.5529

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020757.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00025	22	44	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C C k F r nL+ H rtH Cse_sc020757.1_g020.1 22 YVCDTCCKGFVREQNLQLHGRTH 44 9*********************9 PP
2	zf-C2H2	15.4	5.4e-05	97	119	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC C+k + +Lk H++ + Cse_sc020757.1_g020.1 97 HKCDTCSKAYAAEVDLKAHLKIC 119 79******************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 126 aa Download sequence
MNPVTSDVVA VSANTLLDAR RYVCDTCCKG FVREQNLQLH GRTHNLSFTR RKSSSNAPKK 60 FLCPEPTCIY HNLSRAIGDM GGLKKHYLRK HSTEKNHKCD TCSKAYAAEV DLKAHLKICG 120 STSSYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02080.1	2e-40	C2H2 family protein