PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020757.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 259aa MW: 29321.8 Da PI: 9.9133

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020757.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.9	9.6e-07	45	67	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C C+k F r nL++H rtH Cse_sc020757.1_g030.1 45 YVCDTCSKGFVREQNLQVHGRTH 67 9*********************9 PP
2	zf-C2H2	13.3	0.00025	120	142	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC C+k + +Lk H++ + Cse_sc020757.1_g030.1 120 HKCDTCSKAYAAEVDLKAHLKIC 142 79*******************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
ILIKNTQPKK KKTQKMASGS KSRKDPVRSD IVAVSPNTLL DARRYVCDTC SKGFVREQNL 60 QVHGRTHNLS FTLRKSSSNA PKKFLCPEPT CIYHNPSRAI GDMGGLKKHY LRKHSTEKNH 120 KCDTCSKAYA AEVDLKAHLK ICCSTSSYPP PFNMRHNPVQ VTINQNNSTL TTQSESPSVQ 180 TPFNSYPTIY HYEAQLHDFV AHQGSLMTNQ FMGSNSGQNF PTSFIPSTQQ NQHDFQNNFD 240 KEXVLYTATN GQQCPYRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02080.1	9e-42	C2H2 family protein